Deciphering Transcriptional Programming during Pod and Seed Development Using RNA-Seq in Pigeonpea (Cajanus cajan)
Identifieur interne : 000260 ( Main/Exploration ); précédent : 000259; suivant : 000261Deciphering Transcriptional Programming during Pod and Seed Development Using RNA-Seq in Pigeonpea (Cajanus cajan)
Auteurs : Lekha T. Pazhamala [Inde] ; Gaurav Agarwal [Inde] ; Prasad Bajaj [Inde] ; Vinay Kumar [Inde] ; Akanksha Kulshreshtha [Inde] ; Rachit K. Saxena [Inde] ; Rajeev K. Varshney [Inde, Australie]Source :
- PLoS ONE [ 1932-6203 ] ; 2016.
Abstract
Seed development is an important event in plant life cycle that has interested humankind since ages, especially in crops of economic importance. Pigeonpea is an important grain legume of the semi-arid tropics, used mainly for its protein rich seeds. In order to understand the transcriptional programming during the pod and seed development, RNA-seq data was generated from embryo sac from the day of anthesis (0 DAA), seed and pod wall (5, 10, 20 and 30 DAA) of pigeonpea variety “Asha” (ICPL 87119) using Illumina HiSeq 2500. About 684 million sequencing reads have been generated from nine samples, which resulted in the identification of 27,441 expressed genes after sequence analysis. These genes have been studied for their differentially expression, co-expression, temporal and spatial gene expression. We have also used the RNA-seq data to identify important seed-specific transcription factors, biological processes and associated pathways during seed development process in pigeonpea. The comprehensive gene expression study from flowering to mature pod development in pigeonpea would be crucial in identifying candidate genes involved in seed traits directly or indirectly related to yield and quality. The dataset will serve as an important resource for gene discovery and deciphering the molecular mechanisms underlying various seed related traits.
Url:
DOI: 10.1371/journal.pone.0164959
PubMed: 27760186
PubMed Central: 5070767
Affiliations:
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Varshney</name><affiliation wicri:level="1"><nlm:aff id="aff001"><addr-line>International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, 502 324, India</addr-line></nlm:aff><country xml:lang="fr">Inde</country><wicri:regionArea>International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, 502 324</wicri:regionArea><wicri:noRegion>502 324</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff002"><addr-line>School of Plant Biology and Institute of Agriculture, The University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009, Australia</addr-line></nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea>School of Plant Biology and Institute of Agriculture, The University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009</wicri:regionArea><wicri:noRegion>6009</wicri:noRegion></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Seed development is an important event in plant life cycle that has interested humankind since ages, especially in crops of economic importance. Pigeonpea is an important grain legume of the semi-arid tropics, used mainly for its protein rich seeds. In order to understand the transcriptional programming during the pod and seed development, RNA-seq data was generated from embryo sac from the day of anthesis (0 DAA), seed and pod wall (5, 10, 20 and 30 DAA) of pigeonpea variety “Asha” (ICPL 87119) using Illumina HiSeq 2500. About 684 million sequencing reads have been generated from nine samples, which resulted in the identification of 27,441 expressed genes after sequence analysis. These genes have been studied for their differentially expression, co-expression, temporal and spatial gene expression. We have also used the RNA-seq data to identify important seed-specific transcription factors, biological processes and associated pathways during seed development process in pigeonpea. The comprehensive gene expression study from flowering to mature pod development in pigeonpea would be crucial in identifying candidate genes involved in seed traits directly or indirectly related to yield and quality. The dataset will serve as an important resource for gene discovery and deciphering the molecular mechanisms underlying various seed related traits.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Varshney, Rk" uniqKey="Varshney R">RK Varshney</name></author><author><name sortKey="Terauchi, R" uniqKey="Terauchi R">R Terauchi</name></author><author><name sortKey="Mccouch, Sr" uniqKey="Mccouch S">SR McCouch</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pazhamala, L" uniqKey="Pazhamala L">L Pazhamala</name></author><author><name sortKey="Saxena, Rk" uniqKey="Saxena R">RK Saxena</name></author><author><name sortKey="Singh, Vk" uniqKey="Singh V">VK Singh</name></author><author><name sortKey="Sameerkumar, Cv" uniqKey="Sameerkumar C">CV Sameerkumar</name></author><author><name sortKey="Kumar, V" uniqKey="Kumar V">V Kumar</name></author><author><name sortKey="Sinha, P" uniqKey="Sinha P">P Sinha</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Weber, H" uniqKey="Weber H">H Weber</name></author><author><name sortKey="Borisjuk, L" uniqKey="Borisjuk L">L Borisjuk</name></author><author><name sortKey="Wobus, U" uniqKey="Wobus U">U Wobus</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Le, Bh" uniqKey="Le B">BH Le</name></author><author><name sortKey="Cheng, C" uniqKey="Cheng C">C Cheng</name></author><author><name sortKey="Bui, Aq" uniqKey="Bui A">AQ Bui</name></author><author><name sortKey="Wagmaister, Ja" uniqKey="Wagmaister J">JA Wagmaister</name></author><author><name sortKey="Henry, Kf" uniqKey="Henry K">KF Henry</name></author><author><name sortKey="Pelletier, J" uniqKey="Pelletier J">J Pelletier</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Nookaew, I" uniqKey="Nookaew I">I Nookaew</name></author><author><name sortKey="Papini, M" uniqKey="Papini M">M Papini</name></author><author><name sortKey="Pornputtapong, N" uniqKey="Pornputtapong N">N Pornputtapong</name></author><author><name sortKey="Scalcinati, G" uniqKey="Scalcinati G">G Scalcinati</name></author><author><name sortKey="Fagerberg, L" uniqKey="Fagerberg L">L Fagerberg</name></author><author><name sortKey="Uhlen, M" uniqKey="Uhlen M">M Uhlén</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zhao, S" uniqKey="Zhao S">S Zhao</name></author><author><name sortKey="Fung Leung, W P" uniqKey="Fung Leung W">W-P Fung-Leung</name></author><author><name sortKey="Bittner, A" uniqKey="Bittner A">A Bittner</name></author><author><name sortKey="Ngo, K" uniqKey="Ngo K">K Ngo</name></author><author><name sortKey="Liu, X" uniqKey="Liu X">X Liu</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yu, K" uniqKey="Yu K">K Yu</name></author><author><name sortKey="Xu, Q" uniqKey="Xu Q">Q Xu</name></author><author><name sortKey="Da, X" uniqKey="Da X">X Da</name></author><author><name sortKey="Guo, F" uniqKey="Guo F">F Guo</name></author><author><name sortKey="Ding, Y" uniqKey="Ding Y">Y Ding</name></author><author><name sortKey="Deng, X" uniqKey="Deng X">X Deng</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Singh, Vk" uniqKey="Singh V">VK Singh</name></author><author><name sortKey="Garg, R" uniqKey="Garg R">R Garg</name></author><author><name sortKey="Jain, Ma" uniqKey="Jain M">MA Jain</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Hollender, Ca" uniqKey="Hollender C">CA Hollender</name></author><author><name sortKey="Kang, C" uniqKey="Kang C">C Kang</name></author><author><name sortKey="Darwish, O" uniqKey="Darwish O">O Darwish</name></author><author><name sortKey="Geretz, A" uniqKey="Geretz A">A Geretz</name></author><author><name sortKey="Mattews, Bf" uniqKey="Mattews B">BF Mattews</name></author><author><name sortKey="Slovin, J" uniqKey="Slovin J">J Slovin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jones, Si" uniqKey="Jones S">SI Jones</name></author><author><name sortKey="Vodkin, Lo" uniqKey="Vodkin L">LO Vodkin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Pradhan, S" uniqKey="Pradhan S">S Pradhan</name></author><author><name sortKey="Bandhiwal, N" uniqKey="Bandhiwal N">N Bandhiwal</name></author><author><name sortKey="Shah, N" uniqKey="Shah N">N Shah</name></author><author><name sortKey="Kant, C" uniqKey="Kant C">C Kant</name></author><author><name sortKey="Gaur, R" uniqKey="Gaur R">R Gaur</name></author><author><name sortKey="Bhatia, S" uniqKey="Bhatia S">S Bhatia</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name></author><author><name sortKey="Zeng, B" uniqKey="Zeng B">B Zeng</name></author><author><name sortKey="Zhang, M" uniqKey="Zhang M">M Zhang</name></author><author><name sortKey="Xie, S" uniqKey="Xie S">S Xie</name></author><author><name sortKey="Wang, G" uniqKey="Wang G">G Wang</name></author><author><name sortKey="Hauck, A" uniqKey="Hauck A">A Hauck</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Varshney, Rk" uniqKey="Varshney R">RK Varshney</name></author><author><name sortKey="Chen, W" uniqKey="Chen W">W Chen</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y Li</name></author><author><name sortKey="Bharti, Ak" uniqKey="Bharti A">AK Bharti</name></author><author><name sortKey="Saxena, Rk" uniqKey="Saxena R">RK Saxena</name></author><author><name sortKey="Schlueter, Ja" uniqKey="Schlueter J">JA Schlueter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Fait, A" uniqKey="Fait A">A Fait</name></author><author><name sortKey="Angelovici, R" uniqKey="Angelovici R">R Angelovici</name></author><author><name sortKey="Less, H" uniqKey="Less H">H Less</name></author><author><name sortKey="Ohad, I" uniqKey="Ohad I">I Ohad</name></author><author><name sortKey="Urbanczyk Wochniak, E" uniqKey="Urbanczyk Wochniak E">E Urbanczyk-Wochniak</name></author><author><name sortKey="Fernie, Ar" uniqKey="Fernie A">AR Fernie</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bolger, Am" uniqKey="Bolger A">AM Bolger</name></author><author><name sortKey="Lohse, M" uniqKey="Lohse M">M Lohse</name></author><author><name sortKey="Usadel, B" uniqKey="Usadel B">B Usadel</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Trapnell, C" uniqKey="Trapnell C">C Trapnell</name></author><author><name sortKey="Roberts, A" uniqKey="Roberts A">A Roberts</name></author><author><name sortKey="Goff, L" uniqKey="Goff L">L Goff</name></author><author><name sortKey="Pertea, G" uniqKey="Pertea G">G Pertea</name></author><author><name sortKey="Kim, D" uniqKey="Kim D">D Kim</name></author><author><name sortKey="Kelley, Dr" uniqKey="Kelley D">DR Kelley</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kim, D" uniqKey="Kim D">D Kim</name></author><author><name sortKey="Pertea, G" uniqKey="Pertea G">G Pertea</name></author><author><name sortKey="Trapnell, C" uniqKey="Trapnell C">C Trapnell</name></author><author><name sortKey="Pimentel, H" uniqKey="Pimentel H">H Pimentel</name></author><author><name sortKey="Kelley, R" uniqKey="Kelley R">R Kelley</name></author><author><name sortKey="Salzberg, Sl" uniqKey="Salzberg S">SL Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Langmead, B" uniqKey="Langmead B">B Langmead</name></author><author><name sortKey="Salzberg, S" uniqKey="Salzberg S">S Salzberg</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Roberts, A" uniqKey="Roberts A">A Roberts</name></author><author><name sortKey="Pimentel, H" uniqKey="Pimentel H">H Pimentel</name></author><author><name sortKey="Trapnell, C" uniqKey="Trapnell C">C Trapnell</name></author><author><name sortKey="Pachter, L" uniqKey="Pachter L">L Pachter</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Trapnell, C" uniqKey="Trapnell C">C Trapnell</name></author><author><name sortKey="Williams, Ba" uniqKey="Williams B">BA Williams</name></author><author><name sortKey="Pertea, G" uniqKey="Pertea G">G Pertea</name></author><author><name sortKey="Mortazavi, A" uniqKey="Mortazavi A">A Mortazavi</name></author><author><name sortKey="Kwan, G" uniqKey="Kwan G">G Kwan</name></author><author><name sortKey="Van Baren, Mj" uniqKey="Van Baren M">MJ van Baren</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Saeed, Ai" uniqKey="Saeed A">AI Saeed</name></author><author><name sortKey="Sharov, V" uniqKey="Sharov V">V Sharov</name></author><author><name sortKey="White, J" uniqKey="White J">J White</name></author><author><name sortKey="Li, J" uniqKey="Li J">J Li</name></author><author><name sortKey="Liang, W" uniqKey="Liang W">W Liang</name></author><author><name sortKey="Bhagabati, N" uniqKey="Bhagabati N">N Bhagabati</name></author><author><name sortKey="Braisted, J" uniqKey="Braisted J">J Braisted</name></author><author><name sortKey="Klapa, M" uniqKey="Klapa M">M Klapa</name></author><author><name sortKey="Currier, T" uniqKey="Currier T">T Currier</name></author><author><name sortKey="Thiagarajan, M" uniqKey="Thiagarajan M">M Thiagarajan</name></author><author><name sortKey="Sturn, A" uniqKey="Sturn A">A Sturn</name></author><author><name sortKey="Snuffin, M" uniqKey="Snuffin M">M Snuffin</name></author><author><name sortKey="Rezantsev, A" uniqKey="Rezantsev A">A Rezantsev</name></author><author><name sortKey="Popov, D" uniqKey="Popov D">D Popov</name></author><author><name sortKey="Ryltsov, A" uniqKey="Ryltsov A">A Ryltsov</name></author><author><name sortKey="Kostukovich, E" uniqKey="Kostukovich E">E Kostukovich</name></author><author><name sortKey="Borisovsky, I" uniqKey="Borisovsky I">I Borisovsky</name></author><author><name sortKey="Liu, Z" uniqKey="Liu Z">Z Liu</name></author><author><name sortKey="Vinsavich, A" uniqKey="Vinsavich A">A Vinsavich</name></author><author><name sortKey="Trush, V" uniqKey="Trush V">V Trush</name></author><author><name sortKey="Quackenbush, J" uniqKey="Quackenbush J">J Quackenbush</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Everitt, Bs" uniqKey="Everitt B">BS Everitt</name></author><author><name sortKey="Hothorn, T" uniqKey="Hothorn T">T Hothorn</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Conesa, A" uniqKey="Conesa A">A Conesa</name></author><author><name sortKey="Gotz, S" uniqKey="Gotz S">S Götz</name></author><author><name sortKey="Garcia Gomez, Jm" uniqKey="Garcia Gomez J">JM Garcia-Gomez</name></author><author><name sortKey="Terol, J" uniqKey="Terol J">J Terol</name></author><author><name sortKey="Talon, M" uniqKey="Talon M">M Talon</name></author><author><name sortKey="Robles, M" uniqKey="Robles M">M Robles</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jin, Jp" uniqKey="Jin J">JP Jin</name></author><author><name sortKey="Zhang, H" uniqKey="Zhang H">H Zhang</name></author><author><name sortKey="Kong, L" uniqKey="Kong L">L Kong</name></author><author><name sortKey="Gao, G" uniqKey="Gao G">G Gao</name></author><author><name sortKey="Luo, Jc" uniqKey="Luo J">JC Luo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yanai, I" uniqKey="Yanai I">I Yanai</name></author><author><name sortKey="Benjamin, H" uniqKey="Benjamin H">H Benjamin</name></author><author><name sortKey="Shmoish, M" uniqKey="Shmoish M">M Shmoish</name></author><author><name sortKey="Chalifa Caspi, V" uniqKey="Chalifa Caspi V">V Chalifa-Caspi</name></author><author><name sortKey="Shklar, M" uniqKey="Shklar M">M Shklar</name></author><author><name sortKey="Ophir, R" uniqKey="Ophir R">R Ophir</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Kanehisa, M" uniqKey="Kanehisa M">M Kanehisa</name></author><author><name sortKey="Goto, S" uniqKey="Goto S">S Goto</name></author><author><name sortKey="Sato, Y" uniqKey="Sato Y">Y Sato</name></author><author><name sortKey="Kawashima, M" uniqKey="Kawashima M">M Kawashima</name></author><author><name sortKey="Furumichi, M" uniqKey="Furumichi M">M Furumichi</name></author><author><name sortKey="Tanabe, M" uniqKey="Tanabe M">M Tanabe</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sahoo, D" uniqKey="Sahoo D">D Sahoo</name></author><author><name sortKey="Dill, Dl" uniqKey="Dill D">DL Dill</name></author><author><name sortKey="Tibshirani, R" uniqKey="Tibshirani R">R Tibshirani</name></author><author><name sortKey="Plevritis, Sk" uniqKey="Plevritis S">SK Plevritis</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, H" uniqKey="Wang H">H Wang</name></author><author><name sortKey="Hou, L" uniqKey="Hou L">L Hou</name></author><author><name sortKey="Wang, M" uniqKey="Wang M">M Wang</name></author><author><name sortKey="Mao, P" uniqKey="Mao P">P Mao</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Baud, S" uniqKey="Baud S">S. Baud</name></author><author><name sortKey="Boutin, J P" uniqKey="Boutin J">J.P. Boutin</name></author><author><name sortKey="Miquel, M" uniqKey="Miquel M">M. Miquel</name></author><author><name sortKey="Lepiniec, L" uniqKey="Lepiniec L">L. Lepiniec</name></author><author><name sortKey="Rochat, C" uniqKey="Rochat C">C. Rochat</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Quint, M" uniqKey="Quint M">M. Quint</name></author><author><name sortKey="Gray, W M" uniqKey="Gray W">W.M. Gray</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Bewley, Jd" uniqKey="Bewley J">JD Bewley</name></author><author><name sortKey="Black, M" uniqKey="Black M">M Black</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Dubbs, We" uniqKey="Dubbs W">WE Dubbs</name></author><author><name sortKey="Grimes, Hd" uniqKey="Grimes H">HD Grimes</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Guo, Z" uniqKey="Guo Z">Z Guo</name></author><author><name sortKey="Maki, M" uniqKey="Maki M">M Maki</name></author><author><name sortKey="Ding, R" uniqKey="Ding R">R Ding</name></author><author><name sortKey="Yang, Y" uniqKey="Yang Y">Y Yang</name></author><author><name sortKey="Xiong, L" uniqKey="Xiong L">L Xiong</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Le, B H" uniqKey="Le B">B.H. Le</name></author><author><name sortKey="Cheng, C" uniqKey="Cheng C">C. Cheng</name></author><author><name sortKey="Bui, A Q" uniqKey="Bui A">A.Q. Bui</name></author><author><name sortKey="Wagmaister, J A" uniqKey="Wagmaister J">J.A. Wagmaister</name></author><author><name sortKey="Henry, K F" uniqKey="Henry K">K.F. Henry</name></author><author><name sortKey="Pelletier, J" uniqKey="Pelletier J">J. Pelletier</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yasuaki, K" uniqKey="Yasuaki K">K Yasuaki</name></author><author><name sortKey="Toyoshima, R" uniqKey="Toyoshima R">R Toyoshima</name></author><author><name sortKey="Okuda, R" uniqKey="Okuda R">R Okuda</name></author><author><name sortKey="Usui, H" uniqKey="Usui H">H Usui</name></author><author><name sortKey="Yamamoto, A" uniqKey="Yamamoto A">A Yamamoto</name></author><author><name sortKey="Hattori, T" uniqKey="Hattori T">T Hattori</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ikeda, Y" uniqKey="Ikeda Y">Y. Ikeda</name></author><author><name sortKey="Banno, H" uniqKey="Banno H">H. Banno</name></author><author><name sortKey="Niu, Q W" uniqKey="Niu Q">Q.W. Niu</name></author><author><name sortKey="Howell, S H" uniqKey="Howell S">S.H. Howell</name></author><author><name sortKey="Chua, N H" uniqKey="Chua N">N.H. Chua</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Santos Mendoza, M" uniqKey="Santos Mendoza M">M Santos-Mendoza</name></author><author><name sortKey="Dubreucq, B" uniqKey="Dubreucq B">B Dubreucq</name></author><author><name sortKey="Baud, S" uniqKey="Baud S">S Baud</name></author><author><name sortKey="Parcy, F" uniqKey="Parcy F">F Parcy</name></author><author><name sortKey="Caboche, M" uniqKey="Caboche M">M Caboche</name></author><author><name sortKey="Leponiec, L" uniqKey="Leponiec L">L Leponiec</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Gibson, Si" uniqKey="Gibson S">SI Gibson</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ohto, M" uniqKey="Ohto M">M Ohto</name></author><author><name sortKey="Sandra, L" uniqKey="Sandra L">L Sandra</name></author><author><name sortKey="Stone, Sl" uniqKey="Stone S">SL Stone</name></author><author><name sortKey="Harada, Jj" uniqKey="Harada J">JJ Harada</name></author><author><name sortKey="Bradford, Kj" uniqKey="Bradford K">KJ Bradford</name></author><author><name sortKey="Nonogaki, H" uniqKey="Nonogaki H">H Nonogaki</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Moller, B" uniqKey="Moller B">B Möller</name></author><author><name sortKey="Weijers, D" uniqKey="Weijers D">D Weijers</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chandler, Jw" uniqKey="Chandler J">JW Chandler</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Australie</li><li>Inde</li></country></list><tree><country name="Inde"><noRegion><name sortKey="Pazhamala, Lekha T" sort="Pazhamala, Lekha T" uniqKey="Pazhamala L" first="Lekha T." last="Pazhamala">Lekha T. Pazhamala</name></noRegion><name sortKey="Agarwal, Gaurav" sort="Agarwal, Gaurav" uniqKey="Agarwal G" first="Gaurav" last="Agarwal">Gaurav Agarwal</name><name sortKey="Bajaj, Prasad" sort="Bajaj, Prasad" uniqKey="Bajaj P" first="Prasad" last="Bajaj">Prasad Bajaj</name><name sortKey="Kulshreshtha, Akanksha" sort="Kulshreshtha, Akanksha" uniqKey="Kulshreshtha A" first="Akanksha" last="Kulshreshtha">Akanksha Kulshreshtha</name><name sortKey="Kumar, Vinay" sort="Kumar, Vinay" uniqKey="Kumar V" first="Vinay" last="Kumar">Vinay Kumar</name><name sortKey="Saxena, Rachit K" sort="Saxena, Rachit K" uniqKey="Saxena R" first="Rachit K." last="Saxena">Rachit K. Saxena</name><name sortKey="Varshney, Rajeev K" sort="Varshney, Rajeev K" uniqKey="Varshney R" first="Rajeev K." last="Varshney">Rajeev K. Varshney</name></country><country name="Australie"><noRegion><name sortKey="Varshney, Rajeev K" sort="Varshney, Rajeev K" uniqKey="Varshney R" first="Rajeev K." last="Varshney">Rajeev K. 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